Predicting structure and stability for RNA complexes with intermolecular loop-loop base-pairing
نویسندگان
چکیده
منابع مشابه
Predicting structure and stability for RNA complexes with intermolecular loop-loop base-pairing.
RNA loop-loop interactions are essential for genomic RNA dimerization and regulation of gene expression. In this article, a statistical mechanics-based computational method that predicts the structures and thermodynamic stabilities of RNA complexes with loop-loop kissing interactions is described. The method accounts for the entropy changes for the formation of loop-loop interactions, which is ...
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RNA loop–loop interactions are essential for genomic RNA dimerization and regulation of gene expression. In this article, a statistical mechanics-based computational method that predicts the structures and thermodynamic stabilities of RNA complexes with loop–loop kissing interactions is described. The method accounts for the entropy changes for the formation of loop–loop interactions, which is ...
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BACKGROUND Replication of the ColE1 plasmid of Escherichia coli is regulated by the interaction of sense and antisense plasmid-encoded transcripts. The antisense RNA I negatively regulates the replication of the plasmid by duplex formation with complementary RNA II. The interaction is initiated by the formation of a double helix between seven-nucleotide loops from each RNA and is stabilized by ...
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ژورنال
عنوان ژورنال: RNA
سال: 2014
ISSN: 1355-8382
DOI: 10.1261/rna.043976.113